Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815186.1_cds_XP_016498218.1_12274
CDS Infomation

[gene=LOC107816976] [db_xref=GeneID:107816976] [protein=uncharacterized protein LOC107816976 isoform X4] [protein_id=XP_016498218.1] [location=complement(join(51656..51658,52366..52578,53429..54113,54221..54331,54820..54964,59349..59874,60222..60353))] [gbkey=CDS]
Sequence

ATGGCATCAGCTTCTACAGAGGAAGTGGTGAATGCATTGATGGAATACTTAGTTGATCCT
CACTTGCCTTTGAAATCTTCTGCCATTAAGGAACCTCCCTCTCTTTCTCAGCAGCTCTCT
GTTGCCAAACAGTTGCATGCTGTTGTGTTACTTTACAACTACTACCAGAGGAAGCAAAAT
CCACAGGCACAAAATTTAGACTTTGAGTCATTTTGCAAGTTGGCTGTGGCTCTAAAACCG
GCTTTGGTTTCATACATGAAGTTCATGAATCAATCTGATCCAACTGGCTCCAAGGACACG
GACAATGATCTTTCTGTAGCTGAAAAAGCAATTCAAGATGCTTGCAATATATCTTGCGCT
TTAGATGCCTCCAAAAATGTTCCGTCTATAAACAAATGGCTAATTGCCAAAGCTTCTGTC
TTATTACTAGACTCTAAGAAAGAAACTTGTTGGCTGCTTTATAGTTCTGTCACAGATGGC
GTCTGGTCTCTCCTCGAAAAAAATCGTGAGCTTCCCTCTGCTGAAATTGAAGGTATGGTG
GAGGGAAAACATCCAAACAAAAAGAGGCGAACCAGTATGAGACCAGTGACGGTAGAGCAA
AAAGATGATGACTCTGGCTTTCAGCAGTTTGCGTTTTTGGCTGTCAAGGATGCAACAGGT
ATTTCTCGGTCTGACCTTGTGGTTTTGGAGAAGCATGTGGTATATTCACTAACTAAAGAA
AAGACAGCATCTTGCTTTTACATCATGCAATGTAAATCAATCAATCAGGACATTCAAATT
CCTGTCAAGGAGATTTTTGAGAGTTTACAGGGTCCATTGGTGAAAAAGAGTTCTGGTAGT
TGGTCCACTACAGAAGTAGTTGAGTACTTTCATCTGCTTCCCTATGCCAATATCATGTCA
GCCTTTCTTTTGAGCCAGAGTGTAGAGGAACCTGTAGAAAAGATAGAAGCAAAGACGCCT
GATGAAAGTTATGAAGCTTTAATTGGAACAAAGTCAGATCGTATAAACCTAGAAATTTCA
GAGGCAAAACATGGTGATGGTCGCGAAAAAGTTAGTCGTTCTGCAGTTGGTCAAGAAGCA
ACTGTTGTAGATGGCCACCAGAGGATAAGGAAAAGTGAAGAAGCTGGGAGAGATAGTTCA
ATTAAAAATACAGAAATTGTAGATTTCAGTGATGATAAGCTATCTGATGTCAACTTGGAA
TGTCTAAATGATACAAGTAAAAAGGTACACCACGAAAATAGCAGAGACTATAAAGATTCA
ACTGCAAAAGAATTGTATGATACCATCAACCGTCCAAGGACACAAGAAGATAAAGCCGAG
GAGCTGGTGAAGTCCACTAAAAGCTGTGAAATCAATGATTTTAATGGAATGGAGTTAGCT
GGTGCTCATCCTGAACCTTTGGAGGTGCAAGTGAATGATGATTATCACTTTTCTAGGTCT
CCTACTAGGCCTCAGAGGATGGACATGGATGCTTGTATTCCCTGCTCCAAAAATGGAAAC
AGTAAGGATCGTAAGCTTATTACAAAGGTTTACCATCACGAGAAAAAGAGGACGAGGGTG
AGTGGTGGAGAAATCATTGGAGGTGGTGTAATTTGCAAGGCAGAAAGAACTGATGAAGGG
AAGGCTGGTAAAGAGTGTGGCCTTTCCACTATCTCACCTAATCGAAATGGGATTTCAGTG
GCACATACTGCATTTGTTCCTTATCAGCATGATACTATGGATATAGGCGATTTACAAACT
GTTTTGGCTTCAAAAGAGAAGGCTTTAACTCAAAGTGCCCTTAGAGTTCTTCTTGATAAA
CGAGAGAAACTGTAA

Peptide Sequence

PEP ID

XP_016498218.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107816976 isoform X4 [Nicotiana tabacum]
Sequence

MASASTEEVVNALMEYLVDPHLPLKSSAIKEPPSLSQQLSVAKQLHAVVLLYNYYQRKQN
PQAQNLDFESFCKLAVALKPALVSYMKFMNQSDPTGSKDTDNDLSVAEKAIQDACNISCA
LDASKNVPSINKWLIAKASVLLLDSKKETCWLLYSSVTDGVWSLLEKNRELPSAEIEGMV
EGKHPNKKRRTSMRPVTVEQKDDDSGFQQFAFLAVKDATGISRSDLVVLEKHVVYSLTKE
KTASCFYIMQCKSINQDIQIPVKEIFESLQGPLVKKSSGSWSTTEVVEYFHLLPYANIMS
AFLLSQSVEEPVEKIEAKTPDESYEALIGTKSDRINLEISEAKHGDGREKVSRSAVGQEA
TVVDGHQRIRKSEEAGRDSSIKNTEIVDFSDDKLSDVNLECLNDTSKKVHHENSRDYKDS
TAKELYDTINRPRTQEDKAEELVKSTKSCEINDFNGMELAGAHPEPLEVQVNDDYHFSRS
PTRPQRMDMDACIPCSKNGNSKDRKLITKVYHHEKKRTRVSGGEIIGGGVICKAERTDEG
KAGKECGLSTISPNRNGISVAHTAFVPYQHDTMDIGDLQTVLASKEKALTQSALRVLLDK
REKL

Transcript Sequence

Gene sequence data has not been registered.